A manuscript editor that
catches errors early

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We make it possible to apply large language models safely and transparently in scientific publishing. Our AI understands your manuscript in full context — including cited references and domain language — to provide precise, verifiable assistance that makes research writing faster, clearer, and more accountable.

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Broad Institute
Write your manuscript with AI assistanceCite measurements, references, and mediaSupports LaTeX equations and pseudocodeManage your references libraryFor easy reference importExport to Word

Write your manuscript with AI assistance

More than a manuscript editor—your complete research workspace

Manuscript, notes, measurements, and references—all in one place. Track your experimental data alongside your writing. Control who can make direct edits and who must use track changes. Link measurements from your research notes directly into manuscript text. Manage collaboration permissions at the workspace level. Everything syncs automatically.

A reference manager that actually works

Find papers directly inside First Author with our search engine that prioritizes relevant results—then cite them instantly. No context switching. No broken links.

See exactly who changed what, when

Every edit is attributed. Comments thread directly on the text. Suggest changes that authors can accept or reject. Perfect for reviewer feedback, co-author revisions, and PI comments.

Full control over collaboration

Share links with external collaborators. Decide who can edit directly and who must use track changes.

Enforce track changes

All edits from this link will be tracked

Values that update themselves

Store experimental measurements in your research notes. Reference them in your manuscript. When the analysis changes, every citation updates automatically—no copy-paste errors.

The ptsHOPERONptsH SourceResearch notesanalysis.ipynbLast changed:2 hours agoType:ValueID:m-opero operon spans 12,847 bpLENGTH12,847 bpSourceResearch notesanalysis.ipynbLast changed:Just nowType:ValueID:m-lengt and encodes 7 genesGENE COUNT7 genesSourceResearch notesanalysis.ipynbLast changed:Just nowType:ValueID:m-gene genes. The region has a G+C content of 52.3 %G+C CONTENT52.3 %SourceResearch notesanalysis.ipynbLast changed:Just nowType:FloatID:m-g+c c and an average gene length of 1,347 bpAVG LENGTH1,347 bpSourceResearch notesanalysis.ipynbLast changed:2 hours agoType:ValueID:m-avg l.

Watch the value update automatically • Hover to see measurement details

Two AI assistants designed to catch manuscript errors

Pro and Max plans include Helion and Aureon—specialized AI assistants that review your manuscript at two levels. Helion catches surface issues like typos, grammar, and spelling in real-time. Aureon goes deeper, analyzing structure, logical consistency, and the accuracy of scientific claims. Together, they help ensure your work is polished before submission.

Browser Extension

Save references while you browse

Our Chrome extension automatically detects papers on PubMed, Google Scholar, arXiv, bioRxiv, and publisher sites. One click saves the reference—with PDF and full metadata—directly to your workspace.

  • Automatically extracts title, authors, journal, and DOI
  • Downloads and attaches PDFs when available
  • Generates citation keys for instant manuscript insertion
  • Works with PubMed, Google Scholar, arXiv, bioRxiv, and more
First Author - Reference Importer
FirstAuthor
First Author
Reference Importer
PMPubMed • 32029753
Deep learning enables accurate clustering with batch effect removal in single-cell RNA-seq
by Li X, Wang K, Lyu Y, et al.
Nature Communications (2020)
PDF linkAbstract
Ready to save
My Research Paperedit

Choose your plan

All plans include unlimited workspaces, real-time collaboration, and reference management.

Free

Get started with semantic writing

Free
  • Real-time collaboration
  • Reference manager
  • Track Changes
  • Equation checking
  • Automated reference checks
  • Helion AI manuscript assistant
  • Aureon AI manuscript assistant

Pro

Precise, reference-aware scientific editing

12/mo
Helion AI manuscript assistant

Precise scientific editing

  • Everything in Free
  • AI usage transparency report
  • Helion AI manuscript assistant
  • Track Changes
  • Chat with references
  • Equation checking
  • Automated reference checks (25/month)

Max

Advanced AI for deep manuscript analysis

60/mo
Aureon AI manuscript assistant

Deep manuscript analysis & feedback

  • Everything in Pro
  • Aureon AI manuscript assistant
  • Automated reference checks (100/month)
  • 5× Helion usage
  • Early access to new features

Institutional

For universities, research institutes, and academic organizations. Private deployment, support for self-hosting or private LLM providers, and dedicated support.

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FirstAuthor.ai — Reproducible manuscript writing